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L1_Cas9-Ck4_
OP_073
Version 1
Component
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Details
Types
circular
DnaRegion
Roles
engineered_plasmid
Sequences
OP_073_seq (Version 1)
Components
Access
Instance
Definition
public
public
public
public
public
public
public
public
public
public
public
public
public
TEST_006_0_comp
TEST_007_0_comp
TEST_008_0_comp
TEST_009_0_comp
TEST_010_0_comp
TEST_014_0_comp
TEST_019_0_comp
TEST_020_0_comp
TEST_034_0_comp
TEST_045_0_comp
TEST_073_0_comp
TEST_088_0_comp
TEST_091_0_comp
basis of mobility region from pBR322
high-copy-number ColE1/pMB1/pBR322/pUC origin of replication 2
pVS1 StaA stability protein
pVS1 RepA replication protein
pVS1 oriV origin of replication
nptI / KanR
nosT (MoClo)
35ST (MoClo)
PROM_MpEF1a
AtcoCas9 (Puchta)STOP
rep (pMB1)
AtcoCas9 (Puctha) NoStop
3TERM_Nos-35S
Sequence Annotations
Sequence Annotation
Location
Component
/ Role(s)
SapI recognition site
SapI recognition site
TEST_006_0_annot
TEST_007_0_annot
TEST_008_0_annot
TEST_009_0_annot
TEST_010_0_annot
STA region from pVS1 plasmid
A.tumefaciens plasmid left boundary
A.tumefaciens plasmid right boundary
TEST_014_0_annot
TEST_019_0_annot
TEST_020_0_annot
TATA box
TEST_034_0_annot
NLS_SV40
Intron in 5UTR_MpEF1a
exon 5UTR_MpEF1a
TEST_045_0_annot
5UTR_MpEF1a
exon 5UTR_MpEF1a
TEST_073_0_annot
TEST_088_0_annot
TEST_091_0_annot
468,474
complement(6861,6867)
10933,11073
11259,11847
8198,8827
9256,10329
10395,10589
7959,8959
433,458
6873,6897
complement(11935,12750)
6379,6632
6648,6851
1439,1445
484,1485
6335,6355
1845,2204
2205,2217
2219,6358
1486,2217
1486,1844
complement(11244,11858)
2219,6355
6379,6851
restriction_enzyme_recognition_site
restriction_enzyme_recognition_site
basis of mobility region from pBR322
high-copy-number ColE1/pMB1/pBR322/pUC origin of replication 2
pVS1 StaA stability protein
pVS1 RepA replication protein
pVS1 oriV origin of replication
engineered_region
engineered_region
engineered_region
nptI / KanR
nosT (MoClo)
35ST (MoClo)
engineered_region
PROM_MpEF1a
engineered_region
engineered_region
engineered_region
AtcoCas9 (Puchta)STOP
engineered_region
engineered_region
rep (pMB1)
AtcoCas9 (Puctha) NoStop
3TERM_Nos-35S
Other Properties
synbiohub#ownedBy
user/ykh26
synbiohub#topLevel
OP_073/1
Member of these Collections
Marchantia_OpenPlant_Toolkit
Attachments
VisBol
6c4d6035-ad03-4e9d-8750-66c8d5b9644b
SeqViz
e4a5550d-6dd7-45c7-ae97-be997dcabc1c
CompUse
cd6250b7-dddc-4926-bbe2-2d31c6514508