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L1_UBE2:mT-N7-Ck3
OP_066
Version 1
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Details
Types
circular
DnaRegion
Roles
engineered_plasmid
Sequences
OP_066_seq (Version 1)
Components
Access
Instance
Definition
public
public
public
public
public
public
public
public
public
public
public
public
public
public
public
TEST_006_0_comp
TEST_007_0_comp
TEST_008_0_comp
TEST_009_0_comp
TEST_010_0_comp
TEST_014_0_comp
TEST_019_0_comp
TEST_020_0_comp
TEST_024_0_comp
TEST_026_0_comp
TEST_043_0_comp
TEST_046_0_comp
TEST_073_0_comp
TEST_091_0_comp
TEST_097_0_comp
basis of mobility region from pBR322
high-copy-number ColE1/pMB1/pBR322/pUC origin of replication 2
pVS1 StaA stability protein
pVS1 RepA replication protein
pVS1 oriV origin of replication
nptI / KanR
nosT (MoClo)
35ST (MoClo)
5UTR_MpUBE2 Mapoly0106s0019
PROM_MpUBE2 Mapoly0106s0019
mTurquoise2 no Stop
N7-NLS
rep (pMB1)
3TERM_Nos-35S
mTurquoise2 no ATG no STOP
Sequence Annotations
Sequence Annotation
Location
Component
/ Role(s)
SapI recognition site
SapI recognition site
TEST_006_0_annot
TEST_007_0_annot
TEST_008_0_annot
TEST_009_0_annot
TEST_010_0_annot
STA region from pVS1 plasmid
A.tumefaciens plasmid left boundary
A.tumefaciens plasmid right boundary
TEST_014_0_annot
TEST_019_0_annot
TEST_020_0_annot
exon 5UTR_MpUBE2 Mapoly0106s0019
TEST_024_0_annot
intron in 5UTR_MpUBE2
TEST_026_0_annot
exon 5UTR_MpUBE2 Mapoly0106s0019
TEST_043_0_annot
part of AT4G19150
TEST_046_0_annot
S4xAla linker
TEST_073_0_annot
TEST_091_0_annot
TEST_097_0_annot
468,474
complement(4984,4990)
9056,9196
9382,9970
6321,6950
7379,8452
8518,8712
6082,7082
433,458
4996,5020
complement(10058,10873)
4502,4755
4771,4974
2280,3051
2280,3505
3052,3272
484,2275
3273,3505
3507,4223
4254,4481
4242,4481
4227,4241
complement(9367,9981)
4502,4974
3510,4223
restriction_enzyme_recognition_site
restriction_enzyme_recognition_site
basis of mobility region from pBR322
high-copy-number ColE1/pMB1/pBR322/pUC origin of replication 2
pVS1 StaA stability protein
pVS1 RepA replication protein
pVS1 oriV origin of replication
engineered_region
engineered_region
engineered_region
nptI / KanR
nosT (MoClo)
35ST (MoClo)
engineered_region
5UTR_MpUBE2 Mapoly0106s0019
engineered_region
PROM_MpUBE2 Mapoly0106s0019
engineered_region
mTurquoise2 no Stop
engineered_region
N7-NLS
junction
rep (pMB1)
3TERM_Nos-35S
mTurquoise2 no ATG no STOP
Other Properties
synbiohub#ownedBy
user/ykh26
synbiohub#topLevel
OP_066/1
Member of these Collections
Marchantia_OpenPlant_Toolkit
Attachments
VisBol
51c66a01-af96-48bd-98e4-49de8bc8a9f6
SeqViz
eabdd628-a463-476e-81fa-58e4b091cbdc
CompUse
9679d612-156c-453f-9754-8b44aa9d04d7